Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Gm7153-201ENSMUST00000117092 455 ntBASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm11452-201ENSMUST00000122376 690 ntBASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Mir8098-201ENSMUST00000184011 137 ntBASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm10060-201ENSMUST00000212002 111 ntBASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb3S4R1G7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
H2afb3S4R1G7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
H2afb3S4R1G7 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gm23547-201ENSMUST00000158210 271 ntBASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms