Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Gm36966-201ENSMUST00000192217 413 ntBASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Gm45925-201ENSMUST00000218882 744 ntBASIC15.09■□□□□ 0.01
Msh5Q9QUM7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 AC134439.1-201ENSMUST00000220923 600 ntBASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Zmym2-202ENSMUST00000223669 1281 ntBASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Rubie-203ENSMUST00000227803 2430 ntBASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh5Q9QUM7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.08■□□□□ 0.01
Msh5Q9QUM7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm10499-201ENSMUST00000174094 934 ntBASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm17790-201ENSMUST00000191545 1228 ntBASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm36982-201ENSMUST00000193796 1128 ntBASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm43316-201ENSMUST00000197252 1295 ntBASIC15.08■□□□□ 0
Msh5Q9QUM7 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.08■□□□□ 0
Msh5Q9QUM7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Msh5Q9QUM7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Carlr-201ENSMUST00000181515 2574 ntBASIC15.08■□□□□ 0
Msh5Q9QUM7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh5Q9QUM7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Msh5Q9QUM7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm25109-201ENSMUST00000122474 114 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm37153-201ENSMUST00000193637 231 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm2651-201ENSMUST00000203560 838 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh5Q9QUM7 Gm15590-201ENSMUST00000078419 552 ntBASIC15.07■□□□□ 0
Msh5Q9QUM7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms