Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Mir1897-201ENSMUST00000122581 272 ntBASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Gm27321-201ENSMUST00000185021 205 ntBASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Gm27989-201ENSMUST00000184721 107 ntBASIC17.31■□□□□ 0.36
Ube3bQ9ES34 AA619741-201ENSMUST00000195095 646 ntBASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Gm7775-201ENSMUST00000218871 853 ntBASIC17.31■□□□□ 0.36
Ube3bQ9ES34 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube3bQ9ES34 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm15653-201ENSMUST00000119247 907 ntBASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm12151-201ENSMUST00000121374 290 ntBASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3bQ9ES34 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3bQ9ES34 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3bQ9ES34 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3bQ9ES34 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3bQ9ES34 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms