Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim54Q9ERP3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gm14719-201ENSMUST00000121891 340 ntBASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Mir1897-201ENSMUST00000122581 272 ntBASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gm16215-201ENSMUST00000161990 637 ntBASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim54Q9ERP3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim54Q9ERP3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms