Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.44□□□□□ -0.1
Lima1Q9ERG0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lima1Q9ERG0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lima1Q9ERG0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Gm7230-201ENSMUST00000173026 815 ntBASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lima1Q9ERG0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lima1Q9ERG0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms