Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upf1Q9EPU0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Upf1Q9EPU0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Upf1Q9EPU0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upf1Q9EPU0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm11439-201ENSMUST00000118598 409 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm10275-202ENSMUST00000168697 495 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm18212-201ENSMUST00000211678 889 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm7046-201ENSMUST00000221351 977 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm10275-201ENSMUST00000092620 635 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.33■□□□□ 0.2
Upf1Q9EPU0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Mir686-201ENSMUST00000102174 109 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm12485-201ENSMUST00000119641 291 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm4986-201ENSMUST00000119731 549 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm3508-201ENSMUST00000186012 792 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.32■□□□□ 0.2
Upf1Q9EPU0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upf1Q9EPU0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Snord83b-201ENSMUST00000104546 94 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm12616-201ENSMUST00000118594 382 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm16379-201ENSMUST00000161469 348 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm12624-201ENSMUST00000177615 382 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm12621-201ENSMUST00000177760 382 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm12615-201ENSMUST00000177970 382 ntBASIC16.31■□□□□ 0.2
Upf1Q9EPU0 Gm12622-201ENSMUST00000177975 382 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms