Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.19■□□□□ 0.66
U2af1Q9D883 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
U2af1Q9D883 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.18■□□□□ 0.66
U2af1Q9D883 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Gm27618-201ENSMUST00000183671 60 ntBASIC19.18■□□□□ 0.66
U2af1Q9D883 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
U2af1Q9D883 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1Q9D883 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.18■□□□□ 0.66
U2af1Q9D883 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.17■□□□□ 0.66
U2af1Q9D883 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Gm10576-201ENSMUST00000191927 825 ntBASIC19.17■□□□□ 0.66
U2af1Q9D883 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1Q9D883 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
U2af1Q9D883 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Gm28630-201ENSMUST00000187806 498 ntBASIC19.16■□□□□ 0.66
U2af1Q9D883 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.16■□□□□ 0.66
U2af1Q9D883 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
U2af1Q9D883 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1Q9D883 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm29310-201ENSMUST00000185468 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21825-201ENSMUST00000185728 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm29109-201ENSMUST00000185895 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21896-201ENSMUST00000186520 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21873-201ENSMUST00000186728 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21794-201ENSMUST00000187056 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21880-201ENSMUST00000187275 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21826-201ENSMUST00000187451 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21198-201ENSMUST00000188393 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21749-201ENSMUST00000189343 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21901-201ENSMUST00000189568 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm29424-201ENSMUST00000189716 696 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms