Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Gm12008-201ENSMUST00000117791 755 ntBASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Sh2d4aQ9D7V1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Gm18489-201ENSMUST00000172565 551 ntBASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d4aQ9D7V1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d4aQ9D7V1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Gm18669-201ENSMUST00000216049 778 ntBASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d4aQ9D7V1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms