Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.49□□□□□ -0.09
Ssu72Q9CY97 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Gm18246-201ENSMUST00000221023 728 ntBASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssu72Q9CY97 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Gm13418-201ENSMUST00000119097 944 ntBASIC14.48□□□□□ -0.09
Ssu72Q9CY97 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ssu72Q9CY97 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms