Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx47Q9CWX9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx47Q9CWX9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.03■□□□□ -0
Ddx47Q9CWX9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.03■□□□□ -0
Ddx47Q9CWX9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.03■□□□□ -0
Ddx47Q9CWX9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx47Q9CWX9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx47Q9CWX9 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.02■□□□□ -0
Ddx47Q9CWX9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.02■□□□□ -0
Ddx47Q9CWX9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx47Q9CWX9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx47Q9CWX9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms