Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm7Q9CQQ8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm7Q9CQQ8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Lsm7Q9CQQ8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.74□□□□□ -0.05
Lsm7Q9CQQ8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm13453-201ENSMUST00000118708 357 ntBASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm13823-201ENSMUST00000119930 345 ntBASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm9719-201ENSMUST00000162765 543 ntBASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm28630-201ENSMUST00000187806 498 ntBASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm6888-201ENSMUST00000221983 706 ntBASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm7Q9CQQ8 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Lsm7Q9CQQ8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Gm14767-201ENSMUST00000121559 586 ntBASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm7Q9CQQ8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms