Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Gm14859-201ENSMUST00000117752 357 ntBASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt88Q9CPR6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Gm8097-201ENSMUST00000117903 829 ntBASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.18□□□□□ -0.3
Krt88Q9CPR6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Krt88Q9CPR6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms