Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf1Q99LC2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf1Q99LC2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf1Q99LC2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf1Q99LC2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Cstf1Q99LC2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf1Q99LC2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 App-207ENSMUST00000227737 2827 ntBASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf1Q99LC2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Gm17150-201ENSMUST00000165577 381 ntBASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cstf1Q99LC2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms