Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Gm10499-201ENSMUST00000174094 934 ntBASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.09□□□□□ -0.15
Vmp1Q99KU0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gm14494-201ENSMUST00000118786 435 ntBASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Mir8117-201ENSMUST00000184773 107 ntBASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gm18246-201ENSMUST00000221023 728 ntBASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vmp1Q99KU0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vmp1Q99KU0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vmp1Q99KU0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.15
Vmp1Q99KU0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vmp1Q99KU0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms