Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.32□□□□□ -0.28
Lims1Q99JW4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Gm10060-201ENSMUST00000212002 111 ntBASIC13.31□□□□□ -0.28
Lims1Q99JW4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.31□□□□□ -0.28
Lims1Q99JW4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lims1Q99JW4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.3□□□□□ -0.28
Lims1Q99JW4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm13036-201ENSMUST00000117799 748 ntBASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.3□□□□□ -0.28
Lims1Q99JW4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.3□□□□□ -0.28
Lims1Q99JW4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.3□□□□□ -0.28
Lims1Q99JW4 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.3□□□□□ -0.28
Lims1Q99JW4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.3□□□□□ -0.28
Lims1Q99JW4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lims1Q99JW4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms