Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga3Q91XY5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga3Q91XY5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga3Q91XY5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Gm12008-201ENSMUST00000117791 755 ntBASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Gm14140-201ENSMUST00000119999 995 ntBASIC13.01□□□□□ -0.33
Pcdhga3Q91XY5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms