Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afjQ8R1M2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Gm7230-201ENSMUST00000173026 815 ntBASIC13.58□□□□□ -0.24
H2afjQ8R1M2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afjQ8R1M2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Mir8098-201ENSMUST00000184011 137 ntBASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Gm6550-201ENSMUST00000187574 993 ntBASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Gm10819-201ENSMUST00000099988 561 ntBASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Carlr-201ENSMUST00000181515 2574 ntBASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afjQ8R1M2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Gm11764-201ENSMUST00000120221 623 ntBASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Gm7862-201ENSMUST00000121461 292 ntBASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Gm17971-201ENSMUST00000190239 806 ntBASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H2afjQ8R1M2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms