Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Gm6973-201ENSMUST00000117080 721 ntBASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf7Q8R0S1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Gm11025-201ENSMUST00000140773 466 ntBASIC17.22■□□□□ 0.35
Atf7Q8R0S1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Gm8000-201ENSMUST00000188378 592 ntBASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Gm45612-201ENSMUST00000211320 160 ntBASIC17.22■□□□□ 0.35
Atf7Q8R0S1 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf7Q8R0S1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.21■□□□□ 0.35
Atf7Q8R0S1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf7Q8R0S1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms