Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Shtn1Q8K2Q9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Gm15678-201ENSMUST00000117573 960 ntBASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Gm2451-201ENSMUST00000199447 999 ntBASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Gm10290-201ENSMUST00000200451 999 ntBASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shtn1Q8K2Q9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Gm13464-201ENSMUST00000119418 935 ntBASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shtn1Q8K2Q9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shtn1Q8K2Q9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms