Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Pabpn1Q8CCS6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gm11331-201ENSMUST00000119764 288 ntBASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gm43378-201ENSMUST00000199336 582 ntBASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pabpn1Q8CCS6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Gm7029-201ENSMUST00000173226 450 ntBASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Gm43058-201ENSMUST00000197645 625 ntBASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pabpn1Q8CCS6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Gm13369-201ENSMUST00000119442 987 ntBASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Mir1943-201ENSMUST00000158276 73 ntBASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Mospd4-201ENSMUST00000180618 576 ntBASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Gm37497-201ENSMUST00000195830 798 ntBASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pabpn1Q8CCS6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm8566-201ENSMUST00000120174 465 ntBASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm6222-202ENSMUST00000182143 629 ntBASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm5869-201ENSMUST00000200248 1257 ntBASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm42550-201ENSMUST00000201553 960 ntBASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pabpn1Q8CCS6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Pabpn1Q8CCS6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pabpn1Q8CCS6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Pabpn1Q8CCS6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pabpn1Q8CCS6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC22.14■■□□□ 1.13
Pabpn1Q8CCS6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms