Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17■□□□□ 0.31
Alx1Q8C8B0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17■□□□□ 0.31
Alx1Q8C8B0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17■□□□□ 0.31
Alx1Q8C8B0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17■□□□□ 0.31
Alx1Q8C8B0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17■□□□□ 0.31
Alx1Q8C8B0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alx1Q8C8B0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Gm24543-201ENSMUST00000103867 82 ntBASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 AA619741-201ENSMUST00000195095 646 ntBASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alx1Q8C8B0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gm13223-201ENSMUST00000118609 747 ntBASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gm38294-201ENSMUST00000192831 381 ntBASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Shd-206ENSMUST00000225145 998 ntBASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Alx1Q8C8B0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Gm8410-201ENSMUST00000117225 605 ntBASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 AA543401-201ENSMUST00000164248 1269 ntBASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Dupd1-202ENSMUST00000224735 548 ntBASIC16.97■□□□□ 0.31
Alx1Q8C8B0 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Alx1Q8C8B0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms