Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm29541-201ENSMUST00000191351 678 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.08■□□□□ 0.33
Usp44Q8C2S0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp44Q8C2S0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp44Q8C2S0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm29310-201ENSMUST00000185468 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21825-201ENSMUST00000185728 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm29109-201ENSMUST00000185895 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21896-201ENSMUST00000186520 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21873-201ENSMUST00000186728 696 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms