Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.05■□□□□ -0
Suds3Q8BR65 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.05■□□□□ -0
Suds3Q8BR65 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Suds3Q8BR65 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Suds3Q8BR65 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.05■□□□□ -0
Suds3Q8BR65 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.04■□□□□ -0
Suds3Q8BR65 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Suds3Q8BR65 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.04■□□□□ -0
Suds3Q8BR65 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.04■□□□□ -0
Suds3Q8BR65 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Suds3Q8BR65 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.04■□□□□ -0
Suds3Q8BR65 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Suds3Q8BR65 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Suds3Q8BR65 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Gm27702-201ENSMUST00000184512 56 ntBASIC15.04■□□□□ -0
Suds3Q8BR65 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.04■□□□□ -0
Suds3Q8BR65 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.04■□□□□ -0
Suds3Q8BR65 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Suds3Q8BR65 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Suds3Q8BR65 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Suds3Q8BR65 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Suds3Q8BR65 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.03■□□□□ -0
Suds3Q8BR65 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Mir3113-201ENSMUST00000175478 76 ntBASIC15.03■□□□□ -0
Suds3Q8BR65 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.03■□□□□ -0
Suds3Q8BR65 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.03■□□□□ -0
Suds3Q8BR65 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Suds3Q8BR65 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.03■□□□□ -0
Suds3Q8BR65 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Suds3Q8BR65 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.03■□□□□ -0
Suds3Q8BR65 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Suds3Q8BR65 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
Suds3Q8BR65 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Suds3Q8BR65 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Suds3Q8BR65 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.02■□□□□ -0
Suds3Q8BR65 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.02■□□□□ -0
Suds3Q8BR65 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.02■□□□□ -0
Suds3Q8BR65 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.02■□□□□ -0
Suds3Q8BR65 Gm18246-201ENSMUST00000221023 728 ntBASIC15.02■□□□□ -0
Suds3Q8BR65 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Suds3Q8BR65 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Suds3Q8BR65 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Suds3Q8BR65 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Suds3Q8BR65 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Suds3Q8BR65 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Suds3Q8BR65 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Suds3Q8BR65 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.01□□□□□ -0.01
Suds3Q8BR65 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Suds3Q8BR65 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Suds3Q8BR65 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Suds3Q8BR65 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Suds3Q8BR65 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Suds3Q8BR65 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Suds3Q8BR65 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms