Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.43■□□□□ 0.86
Usp54Q8BL06 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Gm11803-201ENSMUST00000119966 444 ntBASIC20.43■□□□□ 0.86
Usp54Q8BL06 Gm17420-201ENSMUST00000164753 153 ntBASIC20.43■□□□□ 0.86
Usp54Q8BL06 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp54Q8BL06 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp54Q8BL06 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm27486-201ENSMUST00000184923 80 ntBASIC20.42■□□□□ 0.86
Usp54Q8BL06 Ighv1-51-201ENSMUST00000192903 354 ntBASIC20.42■□□□□ 0.86
Usp54Q8BL06 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm10478-201ENSMUST00000084451 396 ntBASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm6091-201ENSMUST00000098307 165 ntBASIC20.42■□□□□ 0.86
Usp54Q8BL06 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.42■□□□□ 0.86
Usp54Q8BL06 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp54Q8BL06 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Gm13612-201ENSMUST00000119276 390 ntBASIC20.41■□□□□ 0.86
Usp54Q8BL06 Gm12485-201ENSMUST00000119641 291 ntBASIC20.41■□□□□ 0.86
Usp54Q8BL06 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.41■□□□□ 0.86
Usp54Q8BL06 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.41■□□□□ 0.86
Usp54Q8BL06 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 AC114543.1-201ENSMUST00000226451 1558 ntBASIC20.41■□□□□ 0.86
Usp54Q8BL06 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp54Q8BL06 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Gm42693-201ENSMUST00000196779 631 ntBASIC20.4■□□□□ 0.86
Usp54Q8BL06 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.4■□□□□ 0.86
Usp54Q8BL06 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp54Q8BL06 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp54Q8BL06 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Usp54Q8BL06 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp54Q8BL06 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.39■□□□□ 0.85
Usp54Q8BL06 Rassf8-202ENSMUST00000058538 1131 ntBASIC20.39■□□□□ 0.85
Usp54Q8BL06 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms