Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm7977-201ENSMUST00000193787 748 ntBASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Gm21362-201ENSMUST00000194272 928 ntBASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.98□□□□□ -0.01
Chmp2bQ8BJF9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp2bQ8BJF9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gm9103-201ENSMUST00000119371 405 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gm11764-201ENSMUST00000120221 623 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp2bQ8BJF9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.96□□□□□ -0.02
Chmp2bQ8BJF9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms