Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Mzt1-203ENSMUST00000227948 952 ntBASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc40Q8BI79 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc40Q8BI79 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc40Q8BI79 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gm18733-201ENSMUST00000173950 856 ntBASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc40Q8BI79 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc40Q8BI79 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc40Q8BI79 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms