Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Gm11950-201ENSMUST00000121615 838 ntBASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Gm12497-201ENSMUST00000138778 237 ntBASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc5a7Q8BGY9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gm5587-201ENSMUST00000206270 674 ntBASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc5a7Q8BGY9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Slc5a7Q8BGY9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms