Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Samm50Q8BGH2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Samm50Q8BGH2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Samm50Q8BGH2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Samm50Q8BGH2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Gm12008-201ENSMUST00000117791 755 ntBASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.14■□□□□ 0.33
Samm50Q8BGH2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.14■□□□□ 0.33
Samm50Q8BGH2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Samm50Q8BGH2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Gm5867-201ENSMUST00000063197 592 ntBASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samm50Q8BGH2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms