Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gm8652-201ENSMUST00000181363 964 ntBASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gm9257-201ENSMUST00000221254 232 ntBASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Gm15429-201ENSMUST00000151268 798 ntBASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Gm27847-201ENSMUST00000183711 107 ntBASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Gm27375-201ENSMUST00000183799 107 ntBASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trnp1Q80ZI1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm18905-201ENSMUST00000205454 928 ntBASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm6091-201ENSMUST00000098307 165 ntBASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnp1Q80ZI1 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Gm12928-201ENSMUST00000117115 573 ntBASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Gm29127-201ENSMUST00000188304 517 ntBASIC16.29■□□□□ 0.2
Trnp1Q80ZI1 Gm19078-201ENSMUST00000206311 727 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms