Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.23■□□□□ 0.03
Srrm3Q80WV7 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Gm9727-201ENSMUST00000161387 555 ntBASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Srrm3Q80WV7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Gm14140-201ENSMUST00000119999 995 ntBASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Matn2-206ENSMUST00000228570 2798 ntBASIC15.21■□□□□ 0.03
Srrm3Q80WV7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Srrm3Q80WV7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Srrm3Q80WV7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Srrm3Q80WV7 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms