Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx55Q6ZPL9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx55Q6ZPL9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx55Q6ZPL9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.51■□□□□ 0.23
Ddx55Q6ZPL9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx55Q6ZPL9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Gm18307-201ENSMUST00000206864 949 ntBASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Gm17795-201ENSMUST00000214505 757 ntBASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx55Q6ZPL9 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm12390-201ENSMUST00000117897 397 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm12882-201ENSMUST00000121696 517 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm6244-201ENSMUST00000178732 841 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm4804-201ENSMUST00000182234 999 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx55Q6ZPL9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx55Q6ZPL9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gm15957-201ENSMUST00000118893 974 ntBASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms