Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm21825-201ENSMUST00000185728 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm29109-201ENSMUST00000185895 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21896-201ENSMUST00000186520 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21873-201ENSMUST00000186728 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21794-201ENSMUST00000187056 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21880-201ENSMUST00000187275 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21826-201ENSMUST00000187451 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21198-201ENSMUST00000188393 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21749-201ENSMUST00000189343 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21901-201ENSMUST00000189568 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm29424-201ENSMUST00000189716 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm28599-201ENSMUST00000189838 694 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21867-201ENSMUST00000189917 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm29269-201ENSMUST00000190087 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21722-201ENSMUST00000190153 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm28423-201ENSMUST00000190701 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21899-201ENSMUST00000190745 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21910-201ENSMUST00000191163 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21849-201ENSMUST00000191571 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm28678-201ENSMUST00000191593 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm20910-201ENSMUST00000193268 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm21871-201ENSMUST00000194621 696 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm44855-201ENSMUST00000205725 362 ntBASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Npc1l1Q6T3U4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Gm14719-201ENSMUST00000121891 340 ntBASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1l1Q6T3U4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Gm7775-201ENSMUST00000218871 853 ntBASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npc1l1Q6T3U4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Syt7-205ENSMUST00000224135 1557 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Gm7488-201ENSMUST00000117148 684 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Gm14042-201ENSMUST00000120139 833 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Gm44344-201ENSMUST00000200287 129 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Npc1l1Q6T3U4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms