Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Gm6089-201ENSMUST00000197666 938 ntBASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.4□□□□□ -0.1
Scaf4Q6PFF0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Scaf4Q6PFF0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Scaf4Q6PFF0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm13464-201ENSMUST00000119418 935 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44357-201ENSMUST00000195897 142 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm19658-201ENSMUST00000196231 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44367-201ENSMUST00000196836 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44350-201ENSMUST00000197197 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44390-201ENSMUST00000197533 144 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44313-201ENSMUST00000198018 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44486-201ENSMUST00000198508 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44314-201ENSMUST00000199263 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44394-201ENSMUST00000199558 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44484-201ENSMUST00000199873 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44466-201ENSMUST00000200264 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm44359-201ENSMUST00000200671 138 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms