Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Gm37153-201ENSMUST00000193637 231 ntBASIC16.37■□□□□ 0.21
Abcf1Q6P542 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.37■□□□□ 0.21
Abcf1Q6P542 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.36■□□□□ 0.21
Abcf1Q6P542 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.36■□□□□ 0.21
Abcf1Q6P542 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.36■□□□□ 0.21
Abcf1Q6P542 AW822252-206ENSMUST00000208904 237 ntBASIC16.36■□□□□ 0.21
Abcf1Q6P542 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abcf1Q6P542 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.35■□□□□ 0.21
Abcf1Q6P542 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Gm27628-201ENSMUST00000184911 107 ntBASIC16.35■□□□□ 0.21
Abcf1Q6P542 Gm5364-201ENSMUST00000216789 889 ntBASIC16.35■□□□□ 0.21
Abcf1Q6P542 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.35■□□□□ 0.21
Abcf1Q6P542 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abcf1Q6P542 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.34■□□□□ 0.21
Abcf1Q6P542 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abcf1Q6P542 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.34■□□□□ 0.21
Abcf1Q6P542 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abcf1Q6P542 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.34■□□□□ 0.21
Abcf1Q6P542 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms