Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.82□□□□□ -0.68
Foxc1Q61572 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.82□□□□□ -0.68
Foxc1Q61572 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.82□□□□□ -0.68
Foxc1Q61572 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 App-207ENSMUST00000227737 2827 ntBASIC10.82□□□□□ -0.68
Foxc1Q61572 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Gm4995-201ENSMUST00000117247 432 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 Gm45610-201ENSMUST00000209227 784 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Gm18246-201ENSMUST00000221023 728 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 AC132881.2-201ENSMUST00000225474 709 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.81□□□□□ -0.68
Foxc1Q61572 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.81□□□□□ -0.68
Foxc1Q61572 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Foxc1Q61572 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Foxc1Q61572 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms