Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.75■□□□□ 0.27
Scnn1aQ61180 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Gm5186-201ENSMUST00000218781 920 ntBASIC16.75■□□□□ 0.27
Scnn1aQ61180 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Syt7-205ENSMUST00000224135 1557 ntBASIC16.74■□□□□ 0.27
Scnn1aQ61180 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Gm19891-201ENSMUST00000189771 303 ntBASIC16.74■□□□□ 0.27
Scnn1aQ61180 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Scnn1aQ61180 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Gm12882-201ENSMUST00000121696 517 ntBASIC16.73■□□□□ 0.27
Scnn1aQ61180 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Gm6916-202ENSMUST00000205523 195 ntBASIC16.73■□□□□ 0.27
Scnn1aQ61180 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.73■□□□□ 0.27
Scnn1aQ61180 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
Scnn1aQ61180 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.72■□□□□ 0.27
Scnn1aQ61180 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.72■□□□□ 0.27
Scnn1aQ61180 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms