Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 AA619741-201ENSMUST00000195095 646 ntBASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc88aQ5SNZ0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm17420-201ENSMUST00000164753 153 ntBASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm8749-201ENSMUST00000117737 331 ntBASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm10275-202ENSMUST00000168697 495 ntBASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm10275-201ENSMUST00000092620 635 ntBASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc88aQ5SNZ0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm11425-201ENSMUST00000119608 498 ntBASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm9182-201ENSMUST00000217829 639 ntBASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm15823-201ENSMUST00000064305 670 ntBASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm9396-201ENSMUST00000076703 567 ntBASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc88aQ5SNZ0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc88aQ5SNZ0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms