Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.83■□□□□ 0.45
Shank3Q4ACU6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shank3Q4ACU6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Shank3Q4ACU6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Gm7399-201ENSMUST00000032395 858 ntBASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.83■□□□□ 0.44
Shank3Q4ACU6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.82■□□□□ 0.44
Shank3Q4ACU6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm26461-201ENSMUST00000175064 290 ntBASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm5370-201ENSMUST00000187187 574 ntBASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shank3Q4ACU6 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Gm5187-201ENSMUST00000117317 991 ntBASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shank3Q4ACU6 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Gm8810-201ENSMUST00000172895 754 ntBASIC17.8■□□□□ 0.44
Shank3Q4ACU6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Shank3Q4ACU6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms