Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm4909-201ENSMUST00000118749 794 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm15429-201ENSMUST00000151268 798 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm7467-201ENSMUST00000185173 652 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Olfr284-202ENSMUST00000206647 966 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 AC154252.1-201ENSMUST00000226041 473 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.26□□□□□ -0.13
Col9a1Q05722 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col9a1Q05722 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a1Q05722 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm24196-201ENSMUST00000179161 110 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm29310-201ENSMUST00000185468 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm8502-201ENSMUST00000185708 901 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21825-201ENSMUST00000185728 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm29109-201ENSMUST00000185895 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21896-201ENSMUST00000186520 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21873-201ENSMUST00000186728 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21794-201ENSMUST00000187056 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21880-201ENSMUST00000187275 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21826-201ENSMUST00000187451 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21198-201ENSMUST00000188393 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm8510-201ENSMUST00000189202 895 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21749-201ENSMUST00000189343 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21901-201ENSMUST00000189568 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm29424-201ENSMUST00000189716 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm28599-201ENSMUST00000189838 694 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21867-201ENSMUST00000189917 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm29269-201ENSMUST00000190087 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21722-201ENSMUST00000190153 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm2316-201ENSMUST00000190613 921 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm28423-201ENSMUST00000190701 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21899-201ENSMUST00000190745 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21910-201ENSMUST00000191163 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21849-201ENSMUST00000191571 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm28678-201ENSMUST00000191593 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm20910-201ENSMUST00000193268 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm21871-201ENSMUST00000194621 696 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.25□□□□□ -0.13
Col9a1Q05722 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Gm3222-201ENSMUST00000071282 990 ntBASIC14.25□□□□□ -0.13
Col9a1Q05722 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col9a1Q05722 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms