Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Npas1P97459 Gm29518-201ENSMUST00000190858 372 ntBASIC12.28□□□□□ -0.44
Npas1P97459 Gm10252-201ENSMUST00000209541 832 ntBASIC12.28□□□□□ -0.44
Npas1P97459 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Npas1P97459 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Npas1P97459 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.27□□□□□ -0.44
Npas1P97459 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.27□□□□□ -0.44
Npas1P97459 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.27□□□□□ -0.44
Npas1P97459 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Npas1P97459 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Npas1P97459 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Npas1P97459 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Npas1P97459 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Npas1P97459 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Npas1P97459 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Npas1P97459 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Npas1P97459 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Npas1P97459 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.27□□□□□ -0.45
Npas1P97459 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.27□□□□□ -0.45
Npas1P97459 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.27□□□□□ -0.45
Npas1P97459 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.27□□□□□ -0.45
Npas1P97459 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Npas1P97459 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.27□□□□□ -0.45
Npas1P97459 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Npas1P97459 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.26□□□□□ -0.45
Npas1P97459 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.26□□□□□ -0.45
Npas1P97459 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.26□□□□□ -0.45
Npas1P97459 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Npas1P97459 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Npas1P97459 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Npas1P97459 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.26□□□□□ -0.45
Npas1P97459 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Gm45328-201ENSMUST00000210942 917 ntBASIC12.26□□□□□ -0.45
Npas1P97459 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.26□□□□□ -0.45
Npas1P97459 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.26□□□□□ -0.45
Npas1P97459 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Npas1P97459 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms