Protein–RNA interactions for Protein: P70663

Sparcl1, SPARC-like protein 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sparcl1P70663 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sparcl1P70663 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.1■□□□□ 0.17
Sparcl1P70663 Gm27618-201ENSMUST00000183671 60 ntBASIC16.1■□□□□ 0.17
Sparcl1P70663 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.1■□□□□ 0.17
Sparcl1P70663 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Gm45053-201ENSMUST00000206112 2499 ntBASIC16.1■□□□□ 0.17
Sparcl1P70663 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sparcl1P70663 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Sparcl1P70663 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Gm12151-201ENSMUST00000121374 290 ntBASIC16.09■□□□□ 0.17
Sparcl1P70663 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Gm38225-201ENSMUST00000194001 393 ntBASIC16.09■□□□□ 0.17
Sparcl1P70663 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sparcl1P70663 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sparcl1P70663 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sparcl1P70663 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sparcl1P70663 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sparcl1P70663 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sparcl1P70663 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sparcl1P70663 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sparcl1P70663 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sparcl1P70663 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.08■□□□□ 0.16
Sparcl1P70663 Gm15693-201ENSMUST00000120470 637 ntBASIC16.08■□□□□ 0.16
Sparcl1P70663 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.08■□□□□ 0.16
Sparcl1P70663 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.08■□□□□ 0.16
Sparcl1P70663 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.08■□□□□ 0.16
Sparcl1P70663 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.08■□□□□ 0.16
Sparcl1P70663 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.08■□□□□ 0.16
Sparcl1P70663 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sparcl1P70663 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.08■□□□□ 0.16
Sparcl1P70663 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sparcl1P70663 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sparcl1P70663 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sparcl1P70663 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sparcl1P70663 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Rab3c-202ENSMUST00000223922 2398 ntBASIC16.07■□□□□ 0.16
Sparcl1P70663 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sparcl1P70663 Gm12428-201ENSMUST00000119844 727 ntBASIC16.07■□□□□ 0.16
Sparcl1P70663 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Sparcl1P70663 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.07■□□□□ 0.16
Sparcl1P70663 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.07■□□□□ 0.16
Sparcl1P70663 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.07■□□□□ 0.16
Sparcl1P70663 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sparcl1P70663 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms