Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.95□□□□□ -0.34
Sf3b6P59708 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.94□□□□□ -0.34
Sf3b6P59708 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3b6P59708 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3b6P59708 Mir8098-201ENSMUST00000184011 137 ntBASIC12.94□□□□□ -0.34
Sf3b6P59708 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.94□□□□□ -0.34
Sf3b6P59708 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Gm6296-201ENSMUST00000222599 943 ntBASIC12.94□□□□□ -0.34
Sf3b6P59708 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b6P59708 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sf3b6P59708 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Gm8749-201ENSMUST00000117737 331 ntBASIC12.93□□□□□ -0.34
Sf3b6P59708 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.93□□□□□ -0.34
Sf3b6P59708 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.93□□□□□ -0.34
Sf3b6P59708 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b6P59708 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3b6P59708 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms