Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.23■□□□□ 0.35
Rhbdl3P58873 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhbdl3P58873 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Gm28760-201ENSMUST00000185995 736 ntBASIC17.22■□□□□ 0.35
Rhbdl3P58873 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.22■□□□□ 0.35
Rhbdl3P58873 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.22■□□□□ 0.35
Rhbdl3P58873 Gm45668-201ENSMUST00000211271 493 ntBASIC17.22■□□□□ 0.35
Rhbdl3P58873 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rhbdl3P58873 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Gm15957-201ENSMUST00000118893 974 ntBASIC17.21■□□□□ 0.35
Rhbdl3P58873 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Gm23984-201ENSMUST00000157139 203 ntBASIC17.21■□□□□ 0.35
Rhbdl3P58873 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.21■□□□□ 0.35
Rhbdl3P58873 Gm28631-201ENSMUST00000190740 334 ntBASIC17.21■□□□□ 0.35
Rhbdl3P58873 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.21■□□□□ 0.35
Rhbdl3P58873 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdl3P58873 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rhbdl3P58873 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rhbdl3P58873 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Rhbdl3P58873 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdl3P58873 Gm15393-201ENSMUST00000120499 219 ntBASIC17.2■□□□□ 0.34
Rhbdl3P58873 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms