Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.79□□□□□ -0.04
Lhx3P50481 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.79□□□□□ -0.04
Lhx3P50481 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx3P50481 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.78□□□□□ -0.04
Lhx3P50481 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.78□□□□□ -0.04
Lhx3P50481 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.78□□□□□ -0.04
Lhx3P50481 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Lhx3P50481 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Gm5566-201ENSMUST00000116118 459 ntBASIC14.78□□□□□ -0.04
Lhx3P50481 Gm15920-201ENSMUST00000118998 402 ntBASIC14.78□□□□□ -0.04
Lhx3P50481 Gm6222-201ENSMUST00000120787 396 ntBASIC14.78□□□□□ -0.04
Lhx3P50481 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.78□□□□□ -0.04
Lhx3P50481 Gm23547-201ENSMUST00000158210 271 ntBASIC14.78□□□□□ -0.04
Lhx3P50481 Gm38294-201ENSMUST00000192831 381 ntBASIC14.78□□□□□ -0.04
Lhx3P50481 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Lhx3P50481 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lhx3P50481 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
Lhx3P50481 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lhx3P50481 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx3P50481 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Lhx3P50481 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx3P50481 Gm8410-201ENSMUST00000117225 605 ntBASIC14.77□□□□□ -0.05
Lhx3P50481 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.77□□□□□ -0.05
Lhx3P50481 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Lhx3P50481 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.77□□□□□ -0.05
Lhx3P50481 Gm44872-201ENSMUST00000207864 420 ntBASIC14.77□□□□□ -0.05
Lhx3P50481 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Lhx3P50481 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Lhx3P50481 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Lhx3P50481 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Lhx3P50481 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx3P50481 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.76□□□□□ -0.05
Lhx3P50481 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.76□□□□□ -0.05
Lhx3P50481 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Lhx3P50481 Gm27622-201ENSMUST00000183779 60 ntBASIC14.76□□□□□ -0.05
Lhx3P50481 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.76□□□□□ -0.05
Lhx3P50481 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lhx3P50481 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Lhx3P50481 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Lhx3P50481 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx3P50481 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.76□□□□□ -0.05
Lhx3P50481 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms