Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Gm12742-201ENSMUST00000117326 410 ntBASIC17.11■□□□□ 0.33
LtbrP50284 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LtbrP50284 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.11■□□□□ 0.33
LtbrP50284 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.11■□□□□ 0.33
LtbrP50284 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LtbrP50284 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LtbrP50284 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.1■□□□□ 0.33
LtbrP50284 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
LtbrP50284 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LtbrP50284 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.1■□□□□ 0.33
LtbrP50284 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.1■□□□□ 0.33
LtbrP50284 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
LtbrP50284 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LtbrP50284 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Gm45251-201ENSMUST00000209486 1465 ntBASIC17.1■□□□□ 0.33
LtbrP50284 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Efs-202ENSMUST00000227037 2540 ntBASIC17.1■□□□□ 0.33
LtbrP50284 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LtbrP50284 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.09■□□□□ 0.33
LtbrP50284 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LtbrP50284 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.09■□□□□ 0.33
LtbrP50284 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Gm9002-201ENSMUST00000178437 499 ntBASIC17.09■□□□□ 0.33
LtbrP50284 Gm3436-201ENSMUST00000179930 840 ntBASIC17.09■□□□□ 0.33
LtbrP50284 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.09■□□□□ 0.33
LtbrP50284 Gm27892-201ENSMUST00000185017 106 ntBASIC17.09■□□□□ 0.33
LtbrP50284 Gm10766-202ENSMUST00000194123 606 ntBASIC17.09■□□□□ 0.33
LtbrP50284 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.09■□□□□ 0.33
LtbrP50284 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LtbrP50284 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.09■□□□□ 0.33
LtbrP50284 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LtbrP50284 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LtbrP50284 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LtbrP50284 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LtbrP50284 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LtbrP50284 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LtbrP50284 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LtbrP50284 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LtbrP50284 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.08■□□□□ 0.32
LtbrP50284 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.08■□□□□ 0.32
LtbrP50284 Mir1982-201ENSMUST00000157368 74 ntBASIC17.08■□□□□ 0.32
LtbrP50284 Gm44044-201ENSMUST00000205178 1089 ntBASIC17.08■□□□□ 0.32
LtbrP50284 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Gm45841-201ENSMUST00000207700 164 ntBASIC17.08■□□□□ 0.32
LtbrP50284 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.08■□□□□ 0.32
LtbrP50284 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms