Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Gm38294-201ENSMUST00000192831 381 ntBASIC13.81□□□□□ -0.2
Nkx2-6P43688 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.81□□□□□ -0.2
Nkx2-6P43688 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-6P43688 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-6P43688 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.8□□□□□ -0.2
Nkx2-6P43688 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nkx2-6P43688 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkx2-6P43688 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Gm9719-201ENSMUST00000162765 543 ntBASIC13.8□□□□□ -0.2
Nkx2-6P43688 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.8□□□□□ -0.2
Nkx2-6P43688 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-6P43688 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-6P43688 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nkx2-6P43688 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms