Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HttP42859 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.26■□□□□ 0.03
HttP42859 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.26■□□□□ 0.03
HttP42859 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.26■□□□□ 0.03
HttP42859 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.26■□□□□ 0.03
HttP42859 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
HttP42859 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HttP42859 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HttP42859 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HttP42859 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.26■□□□□ 0.03
HttP42859 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.25■□□□□ 0.03
HttP42859 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.25■□□□□ 0.03
HttP42859 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.25■□□□□ 0.03
HttP42859 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.25■□□□□ 0.03
HttP42859 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HttP42859 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.25■□□□□ 0.03
HttP42859 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.25■□□□□ 0.03
HttP42859 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.25■□□□□ 0.03
HttP42859 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.25■□□□□ 0.03
HttP42859 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HttP42859 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.24■□□□□ 0.03
HttP42859 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
HttP42859 Gm12134-201ENSMUST00000122109 520 ntBASIC15.24■□□□□ 0.03
HttP42859 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.24■□□□□ 0.03
HttP42859 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.24■□□□□ 0.03
HttP42859 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.24■□□□□ 0.03
HttP42859 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.24■□□□□ 0.03
HttP42859 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HttP42859 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HttP42859 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.23■□□□□ 0.03
HttP42859 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.23■□□□□ 0.03
HttP42859 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HttP42859 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HttP42859 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.23■□□□□ 0.03
HttP42859 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HttP42859 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.23■□□□□ 0.03
HttP42859 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.23■□□□□ 0.03
HttP42859 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.23■□□□□ 0.03
HttP42859 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HttP42859 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.23■□□□□ 0.03
HttP42859 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.23■□□□□ 0.03
HttP42859 Gm26927-201ENSMUST00000182385 965 ntBASIC15.23■□□□□ 0.03
HttP42859 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.23■□□□□ 0.03
HttP42859 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.23■□□□□ 0.03
HttP42859 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.23■□□□□ 0.03
HttP42859 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.23■□□□□ 0.03
HttP42859 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.23■□□□□ 0.03
HttP42859 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HttP42859 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms