Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TfamP40630 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TfamP40630 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.16□□□□□ -0.14
TfamP40630 Mir5131-201ENSMUST00000175426 93 ntBASIC14.16□□□□□ -0.14
TfamP40630 Gm27300-201ENSMUST00000184085 97 ntBASIC14.16□□□□□ -0.14
TfamP40630 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.16□□□□□ -0.14
TfamP40630 Gm27335-201ENSMUST00000184758 97 ntBASIC14.16□□□□□ -0.14
TfamP40630 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.16□□□□□ -0.14
TfamP40630 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.16□□□□□ -0.14
TfamP40630 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.16□□□□□ -0.14
TfamP40630 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
TfamP40630 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
TfamP40630 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TfamP40630 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TfamP40630 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.15□□□□□ -0.14
TfamP40630 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
TfamP40630 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TfamP40630 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TfamP40630 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TfamP40630 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TfamP40630 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.15
TfamP40630 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TfamP40630 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.14□□□□□ -0.15
TfamP40630 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.14□□□□□ -0.15
TfamP40630 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TfamP40630 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TfamP40630 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Mir5126-201ENSMUST00000175513 77 ntBASIC14.14□□□□□ -0.15
TfamP40630 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.14□□□□□ -0.15
TfamP40630 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms