Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.94□□□□□ -0.02
Cxcl12P40224 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.94□□□□□ -0.02
Cxcl12P40224 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.94□□□□□ -0.02
Cxcl12P40224 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.94□□□□□ -0.02
Cxcl12P40224 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Gm27572-201ENSMUST00000183702 255 ntBASIC14.93□□□□□ -0.02
Cxcl12P40224 Gm29649-201ENSMUST00000185649 419 ntBASIC14.93□□□□□ -0.02
Cxcl12P40224 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.93□□□□□ -0.02
Cxcl12P40224 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Gm7561-201ENSMUST00000211203 886 ntBASIC14.93□□□□□ -0.02
Cxcl12P40224 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.93□□□□□ -0.02
Cxcl12P40224 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.93□□□□□ -0.02
Cxcl12P40224 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl12P40224 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl12P40224 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm8652-201ENSMUST00000181363 964 ntBASIC14.92□□□□□ -0.02
Cxcl12P40224 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm7287-201ENSMUST00000205267 602 ntBASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.92□□□□□ -0.02
Cxcl12P40224 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.92□□□□□ -0.02
Cxcl12P40224 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm6091-201ENSMUST00000098307 165 ntBASIC14.92□□□□□ -0.02
Cxcl12P40224 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.92□□□□□ -0.02
Cxcl12P40224 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl12P40224 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl12P40224 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Dancr-204ENSMUST00000132389 2347 ntBASIC14.91□□□□□ -0.02
Cxcl12P40224 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Mir3102-201ENSMUST00000175555 104 ntBASIC14.91□□□□□ -0.02
Cxcl12P40224 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.91□□□□□ -0.02
Cxcl12P40224 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms