Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Fen1P39749 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Fen1P39749 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Fen1P39749 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Fen1P39749 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.72□□□□□ -0.05
Fen1P39749 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.72□□□□□ -0.05
Fen1P39749 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Gm12008-201ENSMUST00000117791 755 ntBASIC14.72□□□□□ -0.05
Fen1P39749 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.72□□□□□ -0.05
Fen1P39749 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Fen1P39749 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.72□□□□□ -0.05
Fen1P39749 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Fen1P39749 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Fen1P39749 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.72□□□□□ -0.05
Fen1P39749 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Fen1P39749 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Fen1P39749 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.71□□□□□ -0.05
Fen1P39749 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fen1P39749 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Fen1P39749 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Fen1P39749 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fen1P39749 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fen1P39749 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Fen1P39749 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Fen1P39749 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.7□□□□□ -0.06
Fen1P39749 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Fen1P39749 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Fen1P39749 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.7□□□□□ -0.06
Fen1P39749 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Fen1P39749 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.7□□□□□ -0.06
Fen1P39749 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.7□□□□□ -0.06
Fen1P39749 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Fen1P39749 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fen1P39749 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Fen1P39749 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.7□□□□□ -0.06
Fen1P39749 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms